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Biodesign International Inc mega 4.0
Mega 4.0, supplied by Biodesign International Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/mega+4%2E0/mega+4+0/10__5423_slash_ppj__oa__03__2023__0039-80-21-24
Average 90 stars, based on 1 article reviews
mega 4.0 - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

Sequencing:

Article Title: Fusarium proliferatum from rainwater and rooted garlic show genetic and pathogenicity differences
Article Snippet: Fusarium proliferatum (Matsushima) Nirenberg is one of the most important Fusarium species considering its worldwide distribution, its pathogenic ability in a wide range of crops, and its mycotoxigenic potential.. F. proliferatum conidia are easily carried by rainwater and, in this work, five isolates from rainwater were evaluated as inoculum sources to produce garlic rot and their pathogenic ability were compared with six F. proliferatum isolates from diseased garlic.. A phylogenetic analysis was also performed to unravel possible genetic differences among the isolates.

Article Title: Identification and Characterization of Diplodia parva and Diplodia crataegicola Causing Black Rot of Chinese Quince
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNA Star software (version 5.02, DNAStar Inc., Madison, WI, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, AZ, USA).

Article Title: Evaluation of Trichoderma atroviride and Trichoderma longibrachiatum as biocontrol agents in controlling red pepper anthracnose in Korea.
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNASTAR software (Version 5.02, DNA Star Inc., Madison, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, USA).

Article Title: Characterization of hepatitis E virus from sporadic hepatitis cases and sewage samples from Vellore, south India
Article Snippet: Dendrograms were constructed using MEGA 4.0 (The Biodesign Institute, Tempe, AZ, USA) and genetic lineages were inferred by the neighbor-joining algorithm using 1000 pseudoreplicates.

Article Title: Purification and Characterization of a New Alginate Lyase from Marine Bacterium Vibrio sp. SY08
Article Snippet: Multiple sequence alignments were obtained using ClustalX 1.83 (Conway Institute UCD Dublin, Dublin, Ireland), and the phylogenetic tree was constructed with the MEGA 4.0 software (Biodesign Institute, Arizona State University, Tempe, AZ, USA).

Article Title: Mitochondrial DNA polymorphisms in Andersen-Tawil syndrome.
Article Snippet: All the sequences obtained were aligned, and polymorphisms were identified using the DnaSP 5.10.1 (Universitat de Barcelona, Barcelona, Spain) and MEGA 4.0 (Center of Evolutionary Functional Genomics Biodesign Institute, Ar‐ izona State University, Arizona, United States) software.

Article Title: Cloning, Expression Profiling and Functional Analysis of CnHMGS, a Gene Encoding 3-hydroxy-3-Methylglutaryl Coenzyme A Synthase from Chamaemelum nobile
Article Snippet: A phylogenetic tree was constructed with CLUSTALX 2.0 (Conway Institute UCD Dublin, Dublin, Ireland, http://www.clustal.org) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA, http://www.megasoftware.net).

Article Title: Identification and Characterization of Xanthomonas arboricola pv. juglandis Causing Bacterial Blight of Walnuts in Korea
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using a DNA star program (version 5.02, DNA Star Inc., Madison, WI, USA) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA).

Software:

Article Title: Fusarium proliferatum from rainwater and rooted garlic show genetic and pathogenicity differences
Article Snippet: Fusarium proliferatum (Matsushima) Nirenberg is one of the most important Fusarium species considering its worldwide distribution, its pathogenic ability in a wide range of crops, and its mycotoxigenic potential.. F. proliferatum conidia are easily carried by rainwater and, in this work, five isolates from rainwater were evaluated as inoculum sources to produce garlic rot and their pathogenic ability were compared with six F. proliferatum isolates from diseased garlic.. A phylogenetic analysis was also performed to unravel possible genetic differences among the isolates.

Article Title: Identification and Characterization of Diplodia parva and Diplodia crataegicola Causing Black Rot of Chinese Quince
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNA Star software (version 5.02, DNAStar Inc., Madison, WI, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, AZ, USA).

Article Title: Evaluation of Trichoderma atroviride and Trichoderma longibrachiatum as biocontrol agents in controlling red pepper anthracnose in Korea.
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNASTAR software (Version 5.02, DNA Star Inc., Madison, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, USA).

Article Title: Characterization of hepatitis E virus from sporadic hepatitis cases and sewage samples from Vellore, south India
Article Snippet: Dendrograms were constructed using MEGA 4.0 (The Biodesign Institute, Tempe, AZ, USA) and genetic lineages were inferred by the neighbor-joining algorithm using 1000 pseudoreplicates.

Article Title: Purification and Characterization of a New Alginate Lyase from Marine Bacterium Vibrio sp. SY08
Article Snippet: Multiple sequence alignments were obtained using ClustalX 1.83 (Conway Institute UCD Dublin, Dublin, Ireland), and the phylogenetic tree was constructed with the MEGA 4.0 software (Biodesign Institute, Arizona State University, Tempe, AZ, USA).

Article Title: Mitochondrial DNA polymorphisms in Andersen-Tawil syndrome.
Article Snippet: All the sequences obtained were aligned, and polymorphisms were identified using the DnaSP 5.10.1 (Universitat de Barcelona, Barcelona, Spain) and MEGA 4.0 (Center of Evolutionary Functional Genomics Biodesign Institute, Ar‐ izona State University, Arizona, United States) software.

Article Title: Cloning, Expression Profiling and Functional Analysis of CnHMGS, a Gene Encoding 3-hydroxy-3-Methylglutaryl Coenzyme A Synthase from Chamaemelum nobile
Article Snippet: A phylogenetic tree was constructed with CLUSTALX 2.0 (Conway Institute UCD Dublin, Dublin, Ireland, http://www.clustal.org) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA, http://www.megasoftware.net).

Article Title: Identification and Characterization of Xanthomonas arboricola pv. juglandis Causing Bacterial Blight of Walnuts in Korea
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using a DNA star program (version 5.02, DNA Star Inc., Madison, WI, USA) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA).

Functional Assay:

Article Title: Fusarium proliferatum from rainwater and rooted garlic show genetic and pathogenicity differences
Article Snippet: Fusarium proliferatum (Matsushima) Nirenberg is one of the most important Fusarium species considering its worldwide distribution, its pathogenic ability in a wide range of crops, and its mycotoxigenic potential.. F. proliferatum conidia are easily carried by rainwater and, in this work, five isolates from rainwater were evaluated as inoculum sources to produce garlic rot and their pathogenic ability were compared with six F. proliferatum isolates from diseased garlic.. A phylogenetic analysis was also performed to unravel possible genetic differences among the isolates.

Article Title: Identification and Characterization of Diplodia parva and Diplodia crataegicola Causing Black Rot of Chinese Quince
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNA Star software (version 5.02, DNAStar Inc., Madison, WI, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, AZ, USA).

Article Title: Evaluation of Trichoderma atroviride and Trichoderma longibrachiatum as biocontrol agents in controlling red pepper anthracnose in Korea.
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNASTAR software (Version 5.02, DNA Star Inc., Madison, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, USA).

Article Title: Characterization of hepatitis E virus from sporadic hepatitis cases and sewage samples from Vellore, south India
Article Snippet: Dendrograms were constructed using MEGA 4.0 (The Biodesign Institute, Tempe, AZ, USA) and genetic lineages were inferred by the neighbor-joining algorithm using 1000 pseudoreplicates.

Article Title: Purification and Characterization of a New Alginate Lyase from Marine Bacterium Vibrio sp. SY08
Article Snippet: Multiple sequence alignments were obtained using ClustalX 1.83 (Conway Institute UCD Dublin, Dublin, Ireland), and the phylogenetic tree was constructed with the MEGA 4.0 software (Biodesign Institute, Arizona State University, Tempe, AZ, USA).

Article Title: Mitochondrial DNA polymorphisms in Andersen-Tawil syndrome.
Article Snippet: All the sequences obtained were aligned, and polymorphisms were identified using the DnaSP 5.10.1 (Universitat de Barcelona, Barcelona, Spain) and MEGA 4.0 (Center of Evolutionary Functional Genomics Biodesign Institute, Ar‐ izona State University, Arizona, United States) software.

Article Title: Cloning, Expression Profiling and Functional Analysis of CnHMGS, a Gene Encoding 3-hydroxy-3-Methylglutaryl Coenzyme A Synthase from Chamaemelum nobile
Article Snippet: A phylogenetic tree was constructed with CLUSTALX 2.0 (Conway Institute UCD Dublin, Dublin, Ireland, http://www.clustal.org) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA, http://www.megasoftware.net).

Article Title: Identification and Characterization of Xanthomonas arboricola pv. juglandis Causing Bacterial Blight of Walnuts in Korea
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using a DNA star program (version 5.02, DNA Star Inc., Madison, WI, USA) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA).

Construct:

Article Title: Fusarium proliferatum from rainwater and rooted garlic show genetic and pathogenicity differences
Article Snippet: Fusarium proliferatum (Matsushima) Nirenberg is one of the most important Fusarium species considering its worldwide distribution, its pathogenic ability in a wide range of crops, and its mycotoxigenic potential.. F. proliferatum conidia are easily carried by rainwater and, in this work, five isolates from rainwater were evaluated as inoculum sources to produce garlic rot and their pathogenic ability were compared with six F. proliferatum isolates from diseased garlic.. A phylogenetic analysis was also performed to unravel possible genetic differences among the isolates.

Article Title: Identification and Characterization of Diplodia parva and Diplodia crataegicola Causing Black Rot of Chinese Quince
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNA Star software (version 5.02, DNAStar Inc., Madison, WI, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, AZ, USA).

Article Title: Evaluation of Trichoderma atroviride and Trichoderma longibrachiatum as biocontrol agents in controlling red pepper anthracnose in Korea.
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using the DNASTAR software (Version 5.02, DNA Star Inc., Madison, USA) and MEGA 4.0, respectively (Biodesign Institute, Tempe, USA).

Article Title: Characterization of hepatitis E virus from sporadic hepatitis cases and sewage samples from Vellore, south India
Article Snippet: Dendrograms were constructed using MEGA 4.0 (The Biodesign Institute, Tempe, AZ, USA) and genetic lineages were inferred by the neighbor-joining algorithm using 1000 pseudoreplicates.

Article Title: Purification and Characterization of a New Alginate Lyase from Marine Bacterium Vibrio sp. SY08
Article Snippet: Multiple sequence alignments were obtained using ClustalX 1.83 (Conway Institute UCD Dublin, Dublin, Ireland), and the phylogenetic tree was constructed with the MEGA 4.0 software (Biodesign Institute, Arizona State University, Tempe, AZ, USA).

Article Title: Mitochondrial DNA polymorphisms in Andersen-Tawil syndrome.
Article Snippet: All the sequences obtained were aligned, and polymorphisms were identified using the DnaSP 5.10.1 (Universitat de Barcelona, Barcelona, Spain) and MEGA 4.0 (Center of Evolutionary Functional Genomics Biodesign Institute, Ar‐ izona State University, Arizona, United States) software.

Article Title: Cloning, Expression Profiling and Functional Analysis of CnHMGS, a Gene Encoding 3-hydroxy-3-Methylglutaryl Coenzyme A Synthase from Chamaemelum nobile
Article Snippet: A phylogenetic tree was constructed with CLUSTALX 2.0 (Conway Institute UCD Dublin, Dublin, Ireland, http://www.clustal.org) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA, http://www.megasoftware.net).

Article Title: Identification and Characterization of Xanthomonas arboricola pv. juglandis Causing Bacterial Blight of Walnuts in Korea
Article Snippet: Sequence alignment and phylogenetic tree construction were performed using a DNA star program (version 5.02, DNA Star Inc., Madison, WI, USA) and MEGA 4.0 (Biodesign Institute, Tempe, AZ, USA).



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Phylogenetic relationship among 10 NDV isolates on the basis of F gene nucleotide sequences between position 47 and 435. Sequences were obtained either from the present study or GenBank. The phylogenetic tree was constructed by joining method on MEGA.

Journal: Veterinary Research Forum : an International Quarterly Journal

Article Title: Phylogenetic characterization of the fusion genes of the Newcastle disease viruses isolated in Fars province poultry farms during 2009-2011

doi:

Figure Lengend Snippet: Phylogenetic relationship among 10 NDV isolates on the basis of F gene nucleotide sequences between position 47 and 435. Sequences were obtained either from the present study or GenBank. The phylogenetic tree was constructed by joining method on MEGA.

Article Snippet: The nucleotide sequence of the NDV isolates, based on a portion of the F gene cleavage site, was processed by BioEdit software (Version 7.0; Isis Pharmaceuticals, Carlsbad, USA) and Clustal W multiple alignment method, the subsequent phylogenetic analysis was implemented using MEGA software (Version 4.0; Biodesign Institute, Tempe, USA).

Techniques: Construct